Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a-core surface polymer ligase waal | SAMEA3752620_03299 | Not Available | Negative | 3437061 - 3438314 | 47404.3 |
| dethiobiotin synthetase | SAMEA3752620_03300 | Not Available | Negative | 3438349 - 3439122 | 30539.3 |
| udp-galactose:(galactosyl) lps alpha1,2-galactosyltransferase waaw | SAMEA3752620_03301 | Not Available | Negative | 3439367 - 3440182 | 30819.9 |
| lipopolysaccharide core biosynthesis protein | SAMEA3752620_03302 | Not Available | Negative | 3440208 - 3440900 | 27029.8 |
| udp-galactose:(glucosyl) lps alpha1,2-galactosyltransferase waat | SAMEA3752620_03303 | Not Available | Negative | 3440910 - 3441905 | 38465.7 |
| udp-glucose:(glucosyl) lps alpha1,3-glucosyltransferase waao | SAMEA3752620_03304 | Not Available | Negative | 3441922 - 3442938 | 38778.9 |
| kinase that phosphorylates core heptose of lipopolysaccharide | SAMEA3752620_03305 | Not Available | Negative | 3442954 - 3443751 | 31052.1 |
| udp-glucose:(heptosyl) lps alpha-1,3-glucosyltransferase | SAMEA3752620_03306 | Not Available | Negative | 3443744 - 3444868 | 42590.8 |
| lipopolysaccharide core biosynthesis protein | SAMEA3752620_03307 | Not Available | Negative | 3444865 - 3445923 | 39400.7 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMEA3752620_03309 | Not Available | Positive | 3446336 - 3447613 | 47279.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





