Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, upf0070 family | SAMEA3752620_00080 | Not Available | Positive | 86251 - 86871 | 22147.2 |
| putative dehydrogenase | SAMEA3752620_00081 | Not Available | Positive | 86882 - 88060 | 41872.6 |
| gtp-binding protein enga | SAMEA3752620_00082 | Not Available | Positive | 88178 - 89650 | 55026.1 |
| protein | SAMEA3752620_00083 | Not Available | Positive | 89712 - 89927 | 7864.48 |
| intimin ((attaching and effacing protein) or invasin protein (sivh-like) | SAMEA3752620_00084 | Not Available | Positive | 90137 - 92314 | 81241.2 |
| putative outer membrane protein | SAMEA3752620_00085 | Not Available | Positive | 92369 - 93346 | 34477.8 |
| outer membrane protein | SAMEA3752620_00086 | Not Available | Positive | 93467 - 101518 | 285932.0 |
| exodeoxyribonuclease 7 large subunit | SAMEA3752620_00087 | Not Available | Negative | 101587 - 102963 | 51597.0 |
| inosine 5'-monophosphate dehydrogenase | SAMEA3752620_00088 | Not Available | Positive | 103125 - 104591 | 52025.6 |
| bifunctional gmp synthase/glutamine amidotransferase protein | SAMEA3752620_00089 | Not Available | Positive | 104660 - 106237 | 58668.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





