Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rhodanase-like exported protein | SAMEA3752620_03289 | Not Available | Negative | 3425881 - 3426312 | 15597.2 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SAMEA3752620_03290 | Not Available | Positive | 3426557 - 3428101 | 56171.0 |
| membrane protein yibp | SAMEA3752620_03291 | Not Available | Positive | 3428135 - 3429394 | 46613.4 |
| putative polysaccharide deacetylase | SAMEA3752620_03292 | Not Available | Positive | 3429398 - 3430357 | 35438.9 |
| putative glycosyl transferase | SAMEA3752620_03293 | Not Available | Negative | 3430344 - 3431378 | 40428.4 |
| threonine 3-dehydrogenase nad(p)-binding protein | SAMEA3752620_03294 | Not Available | Negative | 3431617 - 3432642 | 37257.3 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMEA3752620_03295 | Not Available | Negative | 3432652 - 3433848 | 43119.5 |
| adp-glyceromanno-heptose 6-epimerase rfad | SAMEA3752620_03296 | Not Available | Positive | 3434062 - 3434994 | 34896.0 |
| adp-heptose--lps-heptosyltransferase ii | SAMEA3752620_03297 | Not Available | Positive | 3435004 - 3436050 | 39030.4 |
| lipopolysaccharide heptosyltransferase 1 | SAMEA3752620_03298 | Not Available | Positive | 3436054 - 3437013 | 35484.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





