Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteinyl-trna-specific translation factor | SAMEA3752620_03269 | Not Available | Negative | 3401317 - 3403161 | 68840.5 |
| l-seryl-trna(ser) selenium transferase | SAMEA3752620_03270 | Not Available | Negative | 3403158 - 3404549 | 50698.3 |
| putative glutathione s-transferase | SAMEA3752620_03271 | Not Available | Negative | 3404647 - 3405255 | 22546.3 |
| hlyd-family secretion protein | SAMEA3752620_03272 | Not Available | Negative | 3405326 - 3406462 | 41946.8 |
| inner membrane protein | SAMEA3752620_03273 | Not Available | Negative | 3406465 - 3406827 | 13815.8 |
| pts system subunit iiabc | SAMEA3752620_03274 | Not Available | Positive | 3407364 - 3409277 | 68004.5 |
| mannitol-1-phosphate 5-dehydrogenase | SAMEA3752620_03275 | Not Available | Positive | 3409506 - 3410654 | 41157.4 |
| mannitol operon repressor | SAMEA3752620_03276 | Not Available | Positive | 3410654 - 3411241 | 21991.4 |
| putative cytoplasmic protein | SAMEA3752620_03277 | Not Available | Negative | 3411252 - 3411461 | 8039.8 |
| putative cytoplasmic protein | SAMEA3752620_03278 | Not Available | Positive | 3411745 - 3412107 | 13696.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





