Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin sulfoxide reductase | SAMEA3752620_03227 | Not Available | Negative | 3354571 - 3356904 | 86074.6 |
| putative outer membrane protein | SAMEA3752620_03228 | Not Available | Positive | 3357057 - 3357716 | 22198.6 |
| 2-ketoaldonate reductase/glyoxylate reductase b | SAMEA3752620_03229 | Not Available | Positive | 3357820 - 3358794 | 35404.6 |
| putative lipoprotein | SAMEA3752620_03230 | Not Available | Negative | 3358844 - 3359554 | 25664.5 |
| putative transcriptional regulator | SAMEA3752620_03231 | Not Available | Positive | 3359988 - 3360278 | 11033.5 |
| glycine-trna synthetase, beta subunit | SAMEA3752620_03234 | Not Available | Negative | 3361433 - 3363502 | 76849.2 |
| glycine trna synthetase | SAMEA3752620_03235 | Not Available | Negative | 3363512 - 3364423 | 34718.2 |
| putative lipoprotein | SAMEA3752620_03236 | Not Available | Negative | 3364518 - 3364826 | 11666.3 |
| putative membrane-associated acyltransferase | SAMEA3752620_03237 | Not Available | Positive | 3365001 - 3365996 | 37563.1 |
| inner membrane protein yiaa | SAMEA3752620_03238 | Not Available | Negative | 3366037 - 3366474 | 16115.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





