Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3752620_03217 | Not Available | Positive | 3345490 - 3346701 | 45270.5 |
| merr family transcriptional regulator | SAMEA3752620_03218 | Not Available | Positive | 3346906 - 3347637 | 28236.1 |
| protein | SAMEA3752620_03219 | Not Available | Positive | 3347858 - 3348262 | 15828.0 |
| transposase | SAMEA3752620_03220 | Not Available | Negative | 3348628 - 3349029 | 15507.0 |
| Trna-pro | Not Available | Not Available | Positive | 3349126 - 3349202 | Not Available |
| phosphoethanolamine transferase | SAMEA3752620_03222 | Not Available | Negative | 3349294 - 3350985 | 63837.0 |
| transporter | SAMEA3752620_03223 | Not Available | Negative | 3351309 - 3352517 | 42939.4 |
| lipase | SAMEA3752620_03224 | Not Available | Negative | 3352746 - 3353444 | 25932.0 |
| dna-3-methyladenine glycosylase i | SAMEA3752620_03225 | Not Available | Positive | 3353602 - 3354165 | 21067.1 |
| putative acetyltransferase | SAMEA3752620_03226 | Not Available | Positive | 3354162 - 3354602 | 17096.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





