Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos mutagenesis and repair protein | SAMEA3752620_03196 | Not Available | Negative | 3330461 - 3330880 | 15076.3 |
| putative cytoplasmic protein ycgn | SAMEA3752620_03198 | Not Available | Negative | 3331674 - 3332120 | 17271.5 |
| putative hydrolase | SAMEA3752620_03199 | Not Available | Negative | 3332212 - 3332871 | 23682.4 |
| putative cytoplasmic protein ycgl | SAMEA3752620_03200 | Not Available | Negative | 3332943 - 3333236 | 11259.7 |
| protein ycgk | SAMEA3752620_03201 | Not Available | Positive | 3333478 - 3333879 | 14807.5 |
| fels-1 propage domain-containing protein | SAMEA3752620_03202 | Not Available | Negative | 3333982 - 3334350 | 13388.1 |
| septum formation inhibitor | SAMEA3752620_03203 | Not Available | Positive | 3334870 - 3335565 | 24746.9 |
| septum site-determining protein mind | SAMEA3752620_03204 | Not Available | Positive | 3335589 - 3336401 | 29615.8 |
| cell division topological specificity factor mine | SAMEA3752620_03205 | Not Available | Positive | 3336405 - 3336671 | 10235.5 |
| autotransporter | SAMEA3752620_03206 | Not Available | Negative | 3337037 - 3337297 | 9255.79 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





