Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | SAMEA3752620_00067 | Not Available | Positive | 68598 - 68933 | 12359.5 |
| fes assembly protein iscx | SAMEA3752620_00068 | Not Available | Positive | 68945 - 69145 | 7731.92 |
| peptidase b (aminopeptidase b) | SAMEA3752620_00069 | Not Available | Positive | 69204 - 70487 | 46282.7 |
| 3-mercaptopyruvate sulfurtransferase | SAMEA3752620_00072 | Not Available | Negative | 72201 - 73046 | 30843.5 |
| putative protease inhibitor | SAMEA3752620_00073 | Not Available | Positive | 73253 - 78214 | 181424.0 |
| penicillin-binding protein 1c | SAMEA3752620_00074 | Not Available | Positive | 78251 - 80527 | 83778.2 |
| nucleoside diphosphate kinase | SAMEA3752620_00075 | Not Available | Positive | 80676 - 81107 | 15437.3 |
| radical sam protein | SAMEA3752620_00076 | Not Available | Positive | 81257 - 82411 | 43088.0 |
| putative regulatory protein | SAMEA3752620_00077 | Not Available | Positive | 82696 - 83703 | 36128.6 |
| histidyl-trna synthetase | SAMEA3752620_00079 | Not Available | Positive | 84959 - 86233 | 47032.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





