Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory nitrate reductase 1 subunit gamma | SAMEA3752620_03145 | Not Available | Negative | 3273854 - 3274531 | 25484.9 |
| respiratory nitrate reductase 1 subunit delta | SAMEA3752620_03146 | Not Available | Negative | 3274531 - 3275241 | 26464.4 |
| respiratory nitrate reductase 1 subunit beta | SAMEA3752620_03147 | Not Available | Negative | 3275238 - 3276776 | 58069.5 |
| respiratory nitrate reductase 1 subunit alpha | SAMEA3752620_03148 | Not Available | Negative | 3276773 - 3280516 | 140551.0 |
| nitrite extrusion protein 1 | SAMEA3752620_03149 | Not Available | Negative | 3280909 - 3282300 | 49696.3 |
| uncharacterised protein | SAMEA3752620_03150 | Not Available | Negative | 3282395 - 3282613 | 8585.29 |
| nitrate/nitrite two-component sensor kinase | SAMEA3752620_03151 | Not Available | Positive | 3282639 - 3284435 | 67130.1 |
| transcriptional regulator narl | SAMEA3752620_03152 | Not Available | Positive | 3284428 - 3285078 | 23928.3 |
| invasin | SAMEA3752620_03153 | Not Available | Negative | 3285079 - 3286509 | 53560.3 |
| putative acr involved in intracellular sulfur reduction | SAMEA3752620_03154 | Not Available | Positive | 3286659 - 3287012 | 12693.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





