Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3752620_03114 | Not Available | Positive | 3247076 - 3247255 | 6002.69 |
| ycif protein | SAMEA3752620_03115 | Not Available | Positive | 3247523 - 3247840 | 11625.9 |
| protein ycie | SAMEA3752620_03116 | Not Available | Positive | 3247886 - 3248392 | 18992.6 |
| outer membrane protein w | SAMEA3752620_03117 | Not Available | Negative | 3248451 - 3249089 | 22959.1 |
| membrane protein ycic | SAMEA3752620_03118 | Not Available | Positive | 3249446 - 3250189 | 26406.5 |
| putative intracellular septation protein | SAMEA3752620_03119 | Not Available | Positive | 3250219 - 3250758 | 20791.3 |
| putative acyl-coa thioester hydrolase | SAMEA3752620_03120 | Not Available | Positive | 3250863 - 3251261 | 14231.4 |
| transport protein tonb | SAMEA3752620_03121 | Not Available | Negative | 3251301 - 3252020 | 26049.6 |
| putative cytoplasmic protein ycii | SAMEA3752620_03122 | Not Available | Positive | 3252244 - 3252540 | 10602.6 |
| voltage-gated potassium channel | SAMEA3752620_03123 | Not Available | Positive | 3252841 - 3254094 | 46080.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





