Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | SAMEA3752620_03103 | Not Available | Negative | 3234213 - 3235214 | 36787.4 |
| 23s rrna pseudouridylate synthase b | SAMEA3752620_03104 | Not Available | Negative | 3235384 - 3236259 | 32727.4 |
| putative inner membrane protein | SAMEA3752620_03105 | Not Available | Negative | 3236470 - 3238365 | 71397.4 |
| putative rna binding protein | SAMEA3752620_03106 | Not Available | Negative | 3238393 - 3239013 | 23213.2 |
| putative phosphoesterase | SAMEA3752620_03107 | Not Available | Negative | 3239010 - 3239891 | 32627.8 |
| anthranilate synthase component i | SAMEA3752620_03109 | Not Available | Positive | 3240165 - 3241727 | 57504.7 |
| anthranilate synthase component ii | SAMEA3752620_03110 | Not Available | Positive | 3241727 - 3243322 | 56933.4 |
| tryptophan biosynthesis protein | SAMEA3752620_03111 | Not Available | Positive | 3243326 - 3244684 | 49285.8 |
| tryptophan synthase | SAMEA3752620_03112 | Not Available | Positive | 3244696 - 3245889 | 42981.6 |
| tryptophan synthase alpha chain | SAMEA3752620_03113 | Not Available | Positive | 3245889 - 3246695 | 28754.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





