Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase 1 | SAMEA3752620_03092 | Not Available | Negative | 3223117 - 3225792 | 97750.9 |
| protein, c-ter fragment, truncated protein | SAMEA3752620_03094 | Not Available | Negative | 3226151 - 3226318 | 6369.21 |
| small predicted membrane protein | SAMEA3752620_03095 | Not Available | Negative | 3226321 - 3226449 | 4866.05 |
| hth-type transcriptional regulator cysb | SAMEA3752620_03096 | Not Available | Negative | 3226780 - 3227754 | 36152.5 |
| dna topoisomerase i | SAMEA3752620_03097 | Not Available | Negative | 3227964 - 3230561 | 97342.0 |
| protein | SAMEA3752620_03098 | Not Available | Positive | 3230941 - 3231192 | 9386.17 |
| protease | SAMEA3752620_03099 | Not Available | Negative | 3231228 - 3232277 | 39367.8 |
| putative short chain dehydrogenase | SAMEA3752620_03100 | Not Available | Positive | 3232497 - 3233255 | 27962.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3752620_03101 | Not Available | Positive | 3233252 - 3233842 | 22024.2 |
| uncharacterised protein | SAMEA3752620_03102 | Not Available | Negative | 3233894 - 3234202 | 11636.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





