Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | SAMEA3752620_03072 | Not Available | Positive | 3200770 - 3201762 | 37662.9 |
| peptide abc transporter atp-binding protein | SAMEA3752620_03073 | Not Available | Positive | 3201764 - 3202570 | 30572.5 |
| drug transport transmembrane protein | SAMEA3752620_03074 | Not Available | Negative | 3202618 - 3203781 | 41362.1 |
| outer membrane efflux lipoprotein | SAMEA3752620_03075 | Not Available | Negative | 3203790 - 3205163 | 49135.1 |
| multidrug efflux protein | SAMEA3752620_03076 | Not Available | Negative | 3205167 - 3208274 | 111644.0 |
| acriflavine resistance protein a precursor | SAMEA3752620_03077 | Not Available | Negative | 3208274 - 3209395 | 39714.0 |
| transcriptional repressor | SAMEA3752620_03078 | Not Available | Negative | 3209544 - 3210110 | 21828.5 |
| enoyl-(acyl carrier protein) reductase | SAMEA3752620_03079 | Not Available | Positive | 3210588 - 3211376 | 27895.6 |
| oxidoreductase | SAMEA3752620_03080 | Not Available | Positive | 3211520 - 3212647 | 42094.1 |
| exoribonuclease ii | SAMEA3752620_03081 | Not Available | Positive | 3212715 - 3214649 | 72524.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





