Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylputrescine oxidoreductase | SAMEA3752620_03062 | Not Available | Negative | 3189011 - 3190291 | 47118.1 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | SAMEA3752620_03063 | Not Available | Negative | 3190293 - 3191780 | 53425.5 |
| transcriptional regulator of the polyamine metabolism genes | SAMEA3752620_03064 | Not Available | Negative | 3191930 - 3192487 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | SAMEA3752620_03065 | Not Available | Negative | 3192514 - 3193266 | 27527.1 |
| glutamine synthetase | SAMEA3752620_03066 | Not Available | Positive | 3193490 - 3194908 | 53180.2 |
| putrescine importer | SAMEA3752620_03067 | Not Available | Positive | 3195211 - 3196596 | 50855.9 |
| protein | SAMEA3752620_03068 | Not Available | Positive | 3196730 - 3196975 | 9283.79 |
| peptide abc transporter, substrate-binding protein | SAMEA3752620_03069 | Not Available | Positive | 3197288 - 3198931 | 61568.2 |
| peptide abc transporter permease | SAMEA3752620_03070 | Not Available | Positive | 3198928 - 3199893 | 36026.1 |
| peptide abc transporter permease | SAMEA3752620_03071 | Not Available | Positive | 3199880 - 3200770 | 31564.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





