Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binding-protein-dependent transport system inner membrane protein | SAMEA3752620_03052 | Not Available | Negative | 3180419 - 3181300 | 33243.3 |
| abc transporter substrate-binding protein | SAMEA3752620_03053 | Not Available | Negative | 3181321 - 3182613 | 46805.1 |
| sucrose phosphorylase | SAMEA3752620_03054 | Not Available | Negative | 3182627 - 3184306 | 64130.0 |
| phage shock protein e (rhodanase-like protein) | SAMEA3752620_03055 | Not Available | Negative | 3184520 - 3184834 | 11506.0 |
| peripheral inner membrane phage-shock protein | SAMEA3752620_03056 | Not Available | Negative | 3184909 - 3185130 | 8042.22 |
| phage shock protein c | SAMEA3752620_03057 | Not Available | Negative | 3185139 - 3185498 | 13517.7 |
| phage shock protein b | SAMEA3752620_03058 | Not Available | Negative | 3185498 - 3185722 | 8763.59 |
| phage shock protein a | SAMEA3752620_03059 | Not Available | Negative | 3185776 - 3186444 | 25480.4 |
| phage shock protein operon transcriptional activator | SAMEA3752620_03060 | Not Available | Positive | 3186611 - 3187588 | 36974.7 |
| 4-aminobutyrate aminotransferase | SAMEA3752620_03061 | Not Available | Negative | 3187708 - 3188973 | 44777.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





