Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase | SAMEA3752620_02957 | Not Available | Positive | 3094634 - 3095380 | 27614.1 |
| uncharacterised protein | SAMEA3752620_02958 | Not Available | Positive | 3095534 - 3096427 | 34475.5 |
| inner membrane protein | SAMEA3752620_02959 | Not Available | Negative | 3096404 - 3097183 | 28709.1 |
| metallothionein smta | SAMEA3752620_02960 | Not Available | Positive | 3097319 - 3098104 | 29797.9 |
| chromosome partition protein | SAMEA3752620_02961 | Not Available | Positive | 3098101 - 3099423 | 50609.8 |
| condesin subunit e | SAMEA3752620_02962 | Not Available | Positive | 3099404 - 3100108 | 26949.0 |
| chromosome partition protein | SAMEA3752620_02963 | Not Available | Positive | 3100108 - 3104568 | 170287.0 |
| c32 trna thiolase | SAMEA3752620_03017 | Not Available | Positive | 3144721 - 3145656 | 35516.9 |
| atp-independent rna helicase | SAMEA3752620_03018 | Not Available | Negative | 3145785 - 3147158 | 49292.8 |
| uncharacterised protein | SAMEA3752620_03019 | Not Available | Negative | 3147188 - 3147361 | 6427.87 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





