Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, upf0145 family | SAMEA3752620_02905 | Not Available | Positive | 3029446 - 3029769 | 11465.7 |
| putative n-acetylmuramoyl-l-alanine amidase | SAMEA3752620_02906 | Not Available | Positive | 3029766 - 3030596 | 31117.2 |
| nucleotide di-p-sugar epimerase or dehydratase | SAMEA3752620_02907 | Not Available | Negative | 3030593 - 3031606 | 38087.9 |
| nad(p)-binding rossmann-fold domain | SAMEA3752620_02908 | Not Available | Negative | 3031705 - 3033135 | 53725.2 |
| low specificity l-threonine aldolase | SAMEA3752620_02909 | Not Available | Negative | 3033146 - 3034147 | 36456.8 |
| pyruvate oxidase | SAMEA3752620_02910 | Not Available | Negative | 3034184 - 3035902 | 62016.9 |
| hcp oxidoreductase, nadh-dependent | SAMEA3752620_02911 | Not Available | Negative | 3036035 - 3037003 | 35713.8 |
| hydroxylamine reductase | SAMEA3752620_02912 | Not Available | Negative | 3037015 - 3038667 | 60051.3 |
| transporter | SAMEA3752620_02913 | Not Available | Negative | 3038811 - 3039710 | 32342.2 |
| aquaporin z | SAMEA3752620_02914 | Not Available | Negative | 3040167 - 3040862 | 23675.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





