Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor-type transcriptional regulator | SAMEA3752620_02884 | Not Available | Positive | 3012511 - 3013047 | 20308.6 |
| putative transport protein with two rck domains | SAMEA3752620_02886 | Not Available | Negative | 3013222 - 3014907 | 60327.0 |
| inner membrane protein ybjm | SAMEA3752620_02887 | Not Available | Positive | 3015177 - 3015554 | 14213.0 |
| glutaredoxin | SAMEA3752620_02888 | Not Available | Negative | 3015584 - 3015841 | 9695.39 |
| inner membrane protein | SAMEA3752620_02889 | Not Available | Positive | 3016001 - 3016288 | 10518.3 |
| nitroreductase a | SAMEA3752620_02890 | Not Available | Positive | 3016272 - 3016994 | 26848.1 |
| ribosomal protein s6 modification protein | SAMEA3752620_02891 | Not Available | Positive | 3017055 - 3017957 | 32438.5 |
| tpr repeat-containing protein | SAMEA3752620_02892 | Not Available | Positive | 3018045 - 3018521 | 17667.1 |
| putrescine abc transporter substrate-binding protein | SAMEA3752620_02893 | Not Available | Positive | 3018872 - 3019984 | 40857.7 |
| putrescine abc transporter atp-binding protein | SAMEA3752620_02894 | Not Available | Positive | 3020079 - 3021212 | 41981.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





