Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm formation regulatory protein bssr | SAMEA3752620_02874 | Not Available | Positive | 3003343 - 3003726 | 14536.6 |
| aldose sugar dehydrogenase | SAMEA3752620_02875 | Not Available | Positive | 3003837 - 3004952 | 41087.9 |
| glutathione s-transferase | SAMEA3752620_02876 | Not Available | Negative | 3004949 - 3005575 | 23714.4 |
| d-alanyl-d-alanine carboxypeptidase | SAMEA3752620_02877 | Not Available | Positive | 3005821 - 3007023 | 43689.4 |
| deoxyribose operon repressor | SAMEA3752620_02878 | Not Available | Negative | 3007070 - 3007828 | 28563.6 |
| putative phosphatase | SAMEA3752620_02879 | Not Available | Negative | 3007886 - 3008482 | 22419.9 |
| multidrug translocase mdfa | SAMEA3752620_02880 | Not Available | Positive | 3008767 - 3009999 | 44351.8 |
| protein | SAMEA3752620_02881 | Not Available | Negative | 3010040 - 3010312 | 9587.66 |
| putative hydrolase | SAMEA3752620_02882 | Not Available | Negative | 3010404 - 3011219 | 30162.8 |
| deor-type transcriptional regulator | SAMEA3752620_02883 | Not Available | Negative | 3011219 - 3012346 | 38655.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





