Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transporter atp-binding protein | SAMEA3752620_02864 | Not Available | Positive | 2991661 - 2993532 | 69205.4 |
| putative binding protein ylib precursor | SAMEA3752620_02865 | Not Available | Positive | 2993552 - 2995090 | 56447.0 |
| abc transporter permease | SAMEA3752620_02866 | Not Available | Positive | 2995108 - 2996028 | 34068.5 |
| abc transporter permease | SAMEA3752620_02867 | Not Available | Positive | 2996031 - 2996942 | 33254.3 |
| cyclic di-gmp phosphodiesterase | SAMEA3752620_02868 | Not Available | Positive | 2997120 - 2997932 | 31381.7 |
| cyclic di-gmp phosphodiesterase | SAMEA3752620_02869 | Not Available | Positive | 2998029 - 2999468 | 54852.1 |
| putative signaling protein | SAMEA3752620_02870 | Not Available | Positive | 2999476 - 3000804 | 49875.7 |
| putative regulatory protein | SAMEA3752620_02871 | Not Available | Negative | 3000874 - 3001203 | 11982.8 |
| uncharacterized protein conserved in bacteria | SAMEA3752620_02872 | Not Available | Negative | 3001193 - 3001579 | 14294.2 |
| radical sam superfamily protein | SAMEA3752620_02873 | Not Available | Negative | 3001805 - 3003130 | 49583.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





