Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycosyl transferase | SAMEA3752620_02834 | Not Available | Positive | 2959355 - 2960317 | 35082.7 |
| putative dehydrogenase | SAMEA3752620_02835 | Not Available | Positive | 2960458 - 2961543 | 38929.4 |
| protein | SAMEA3752620_02836 | Not Available | Negative | 2961772 - 2962032 | 8568.2 |
| putative zinc ion binding protein | SAMEA3752620_02837 | Not Available | Negative | 2962297 - 2962563 | 9804.42 |
| hydroxylase | SAMEA3752620_02838 | Not Available | Negative | 2962637 - 2963311 | 25383.0 |
| catecholate siderophore tonb-dependent receptor | SAMEA3752620_02839 | Not Available | Negative | 2963527 - 2965164 | 59161.0 |
| tonb-dependent receptor fiu | SAMEA3752620_02840 | Not Available | Negative | 2965231 - 2965809 | 20100.2 |
| colanic acid mucoidy stimulation protein | SAMEA3752620_02841 | Not Available | Negative | 2966074 - 2966334 | 8908.71 |
| sam-dependent methyltransferase | SAMEA3752620_02842 | Not Available | Positive | 2966610 - 2967536 | 34181.8 |
| membrane protein ybio | SAMEA3752620_02843 | Not Available | Negative | 2967533 - 2969758 | 81931.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





