Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrabc system protein b (excinuclease abc subunit b) | SAMEA3752620_02813 | Not Available | Positive | 2938256 - 2940277 | 76230.6 |
| transferase with nad(p)-binding rossmann-fold domain | SAMEA3752620_02814 | Not Available | Negative | 2940469 - 2941377 | 32705.9 |
| molybdenum cofactor biosynthesis protein b | SAMEA3752620_02816 | Not Available | Positive | 2942785 - 2943297 | 18666.1 |
| molybdenum cofactor biosynthesis protein c | SAMEA3752620_02817 | Not Available | Positive | 2943300 - 2943785 | 17468.3 |
| molybdopterin converting factor subunit 1 | SAMEA3752620_02818 | Not Available | Positive | 2943778 - 2944023 | 8726.33 |
| molybdopterin converting factor subunit 2 | SAMEA3752620_02819 | Not Available | Positive | 2944025 - 2944477 | 16996.0 |
| inner membrane protein | SAMEA3752620_02820 | Not Available | Positive | 2944614 - 2945318 | 25903.5 |
| inner membrane protein | SAMEA3752620_02821 | Not Available | Positive | 2945524 - 2945913 | 14515.9 |
| inner membrane protein | SAMEA3752620_02822 | Not Available | Negative | 2945949 - 2946905 | 35838.4 |
| putative phospholipase | SAMEA3752620_02823 | Not Available | Negative | 2946905 - 2948146 | 47641.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





