Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methylitaconate isomerase | SAMEA3752620_02803 | Not Available | Positive | 2925582 - 2926634 | 37008.7 |
| putative sodium:sulfate symporter | SAMEA3752620_02804 | Not Available | Positive | 2926710 - 2928143 | 51326.8 |
| putative aconitase | SAMEA3752620_02805 | Not Available | Positive | 2928326 - 2930587 | 81435.1 |
| acyl-coa thioester hydrolase | SAMEA3752620_02806 | Not Available | Negative | 2930728 - 2932011 | 46010.6 |
| putative phosphatidylethanolamine-binding protein | SAMEA3752620_02807 | Not Available | Negative | 2932163 - 2932639 | 17100.1 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMEA3752620_02808 | Not Available | Negative | 2932698 - 2933987 | 47230.3 |
| biotin synthetase | SAMEA3752620_02809 | Not Available | Positive | 2934074 - 2935114 | 38664.4 |
| 8-amino-7-oxononanoate synthase | SAMEA3752620_02810 | Not Available | Positive | 2935111 - 2936265 | 41505.6 |
| biotin biosynthesis protein bioc | SAMEA3752620_02811 | Not Available | Positive | 2936252 - 2937007 | 28296.9 |
| dithiobiotin synthetase | SAMEA3752620_02812 | Not Available | Positive | 2937000 - 2937677 | 24121.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





