Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photolyase, fad-binding | SAMEA3752620_02743 | Not Available | Positive | 2868845 - 2870263 | 53613.7 |
| putative oligopeptide transporter | SAMEA3752620_02744 | Not Available | Negative | 2870306 - 2871787 | 54160.1 |
| hydrolase-oxidase | SAMEA3752620_02745 | Not Available | Positive | 2872058 - 2872801 | 26894.0 |
| putative allophanate hydrolase subunit 1 | SAMEA3752620_02746 | Not Available | Positive | 2872824 - 2873480 | 23948.0 |
| putative allophanate hydrolase subunit 2 | SAMEA3752620_02747 | Not Available | Positive | 2873474 - 2874406 | 34448.6 |
| lamb/ycsf-family protein | SAMEA3752620_02748 | Not Available | Positive | 2874396 - 2875130 | 25948.0 |
| endonuclease viii (dna glycosylase/ap lyase nei) | SAMEA3752620_02749 | Not Available | Positive | 2875166 - 2875957 | 29889.0 |
| transport protein abrb | SAMEA3752620_02750 | Not Available | Negative | 2875954 - 2877000 | 36835.0 |
| putative fimbrial protein | SAMEA3752620_02751 | Not Available | Negative | 2877153 - 2878214 | 39583.7 |
| chaperone, papd family | SAMEA3752620_02752 | Not Available | Negative | 2878211 - 2878942 | 27149.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





