Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3752620_02732 | Not Available | Positive | 2860777 - 2861103 | 12747.0 |
| h repeat-associated protein | SAMEA3752620_02733 | Not Available | Positive | 2861783 - 2862391 | 22732.3 |
| transposase | SAMEA3752620_02734 | Not Available | Positive | 2862618 - 2862920 | 11449.9 |
| rhs repeat family protein | SAMEA3752620_02735 | Not Available | Positive | 2862934 - 2863578 | 24325.7 |
| uncharacterised protein | SAMEA3752620_02736 | Not Available | Positive | 2863578 - 2863946 | 14357.5 |
| h repeat-associated protein | SAMEA3752620_02738 | Not Available | Positive | 2864479 - 2865615 | 43205.0 |
| uncharacterised protein | SAMEA3752620_02739 | Not Available | Positive | 2865693 - 2866088 | 15531.4 |
| uncharacterised protein | SAMEA3752620_02740 | Not Available | Positive | 2866701 - 2867135 | 16925.4 |
| h repeat-containing rhs element protein | SAMEA3752620_02741 | Not Available | Positive | 2867708 - 2868037 | 12075.5 |
| photoreactivation-associated protein | SAMEA3752620_02742 | Not Available | Positive | 2868339 - 2868848 | 20356.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





