Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | SAMEA3752620_00025 | Not Available | Positive | 24269 - 25000 | 26399.9 |
| holo-[acyl-carrier-protein] synthase | SAMEA3752620_00026 | Not Available | Positive | 25000 - 25380 | 14095.2 |
| 4fe-4s binding protein | SAMEA3752620_00027 | Not Available | Negative | 26076 - 26336 | 9848.85 |
| rpir-family transcriptional regulator | SAMEA3752620_00028 | Not Available | Negative | 26392 - 27240 | 30679.3 |
| had hydrolase yfhb | SAMEA3752620_00029 | Not Available | Positive | 27449 - 28084 | 24437.8 |
| pp_00028 | SAMEA3752620_00030 | Not Available | Positive | 28142 - 28645 | Not Available |
| putative lytic transglycosylase | SAMEA3752620_00031 | Not Available | Negative | 28642 - 30198 | 58257.2 |
| phosphoribosylformylglycinamidine synthase | SAMEA3752620_00032 | Not Available | Positive | 30456 - 34343 | 141331.0 |
| sensor-like histidine kinase yfhk | SAMEA3752620_00035 | Not Available | Positive | 34945 - 36327 | 51515.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 35499 - 35604 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





