Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | SAMEA3752620_02722 | Not Available | Negative | 2853176 - 2854123 | 34214.4 |
| polypeptide deformylase | SAMEA3752620_02723 | Not Available | Negative | 2854138 - 2854647 | 19343.6 |
| dna protecting protein dpra | SAMEA3752620_02724 | Not Available | Positive | 2854777 - 2855901 | 40985.2 |
| protein smg | SAMEA3752620_02725 | Not Available | Positive | 2855873 - 2856346 | 18484.2 |
| putative dna topoisomerase | SAMEA3752620_02726 | Not Available | Positive | 2856375 - 2856917 | 19845.9 |
| ribosome maturation factor | SAMEA3752620_02727 | Not Available | Positive | 2856922 - 2857494 | 20641.7 |
| shikimate dehydrogenase | SAMEA3752620_02728 | Not Available | Positive | 2857499 - 2858317 | 29380.4 |
| transcriptional regulator | SAMEA3752620_02729 | Not Available | Positive | 2858314 - 2858571 | 10007.5 |
| putative transferase | SAMEA3752620_02730 | Not Available | Negative | 2858547 - 2859101 | 20276.3 |
| protein rhsa | SAMEA3752620_02731 | Not Available | Positive | 2859783 - 2860775 | 38014.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





