Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s11 | SAMEA3752620_02712 | Not Available | Positive | 2846239 - 2846628 | 13845.7 |
| 30s ribosomal protein s4 | SAMEA3752620_02713 | Not Available | Positive | 2846662 - 2847282 | 23470.5 |
| dna-directed rna polymerase subunit alpha | SAMEA3752620_02714 | Not Available | Positive | 2847308 - 2848297 | 36513.9 |
| 50s ribosomal protein l17 | SAMEA3752620_02715 | Not Available | Positive | 2848338 - 2848721 | 14365.4 |
| conserved protein, duf1992 family | SAMEA3752620_02716 | Not Available | Positive | 2848828 - 2849196 | 13928.6 |
| putative zn(ii)-responsive regulator | SAMEA3752620_02717 | Not Available | Positive | 2849207 - 2849632 | 16194.4 |
| regulator | SAMEA3752620_02718 | Not Available | Positive | 2849688 - 2849906 | 8199.88 |
| large-conductance mechanosensitive channel | SAMEA3752620_02719 | Not Available | Negative | 2849903 - 2850313 | 14987.7 |
| trk system potassium uptake protein trka | SAMEA3752620_02720 | Not Available | Negative | 2850443 - 2851819 | 50370.8 |
| ribosomal rna small subunit methyltransferase b | SAMEA3752620_02721 | Not Available | Negative | 2851841 - 2853130 | 48281.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





