Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l5 | SAMEA3752620_02701 | Not Available | Positive | 2840899 - 2841438 | 20302.7 |
| 30s ribosomal protein s14 | SAMEA3752620_02702 | Not Available | Positive | 2841453 - 2841758 | 11581.1 |
| 30s ribosomal protein s8 | SAMEA3752620_02703 | Not Available | Positive | 2841792 - 2842184 | 14127.4 |
| 50s ribosomal protein l6 | SAMEA3752620_02704 | Not Available | Positive | 2842197 - 2842730 | 18904.9 |
| 50s ribosomal protein l18 | SAMEA3752620_02705 | Not Available | Positive | 2842740 - 2843093 | 12770.4 |
| 30s ribosomal protein s5 | SAMEA3752620_02706 | Not Available | Positive | 2843108 - 2843611 | 17604.5 |
| 50s ribosomal protein l30 | SAMEA3752620_02707 | Not Available | Positive | 2843615 - 2843794 | 6542.23 |
| 50s ribosomal protein l15 | SAMEA3752620_02708 | Not Available | Positive | 2843798 - 2844232 | 14967.4 |
| preprotein translocase membrane subunit | SAMEA3752620_02709 | Not Available | Positive | 2844240 - 2845571 | 48514.7 |
| 50s ribosomal protein l36 | SAMEA3752620_02710 | Not Available | Positive | 2845603 - 2845719 | 4364.59 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





