Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein g | SAMEA3752620_02681 | Not Available | Negative | 2826877 - 2827314 | 15925.1 |
| general secretion pathway protein f | SAMEA3752620_02682 | Not Available | Negative | 2827324 - 2828520 | 44321.9 |
| general secretion pathway protein e | SAMEA3752620_02683 | Not Available | Negative | 2828517 - 2829998 | 54626.9 |
| general secretion pathway protein d | SAMEA3752620_02684 | Not Available | Negative | 2830008 - 2831960 | 70797.3 |
| general secretion pathway protein c | SAMEA3752620_02685 | Not Available | Negative | 2831944 - 2832759 | 30109.0 |
| general secretion pathway protein a | SAMEA3752620_02686 | Not Available | Positive | 2832939 - 2834408 | 55258.9 |
| calcium-binding protein required for initiation of chromosome replication | SAMEA3752620_02687 | Not Available | Positive | 2834410 - 2834829 | 15892.8 |
| 30s ribosomal protein s10 | SAMEA3752620_02688 | Not Available | Positive | 2835067 - 2835378 | 11736.3 |
| 50s ribosomal protein l3 | SAMEA3752620_02689 | Not Available | Positive | 2835411 - 2836040 | 22244.8 |
| 50s ribosomal protein l4 | SAMEA3752620_02690 | Not Available | Positive | 2836051 - 2836656 | 22087.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





