Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chitinase/lysozyme | SAMEA3752620_02671 | Not Available | Positive | 2818475 - 2821177 | 97374.6 |
| bacterioferritin-associated ferredoxin | SAMEA3752620_02672 | Not Available | Positive | 2821346 - 2821540 | 7363.04 |
| bacterioferritin | SAMEA3752620_02673 | Not Available | Positive | 2821612 - 2822088 | 18526.2 |
| type 4 prepilin-like proteins leader peptide processing enzyme | SAMEA3752620_02674 | Not Available | Negative | 2822117 - 2822794 | 24814.1 |
| general secretion pathway protein m | SAMEA3752620_02675 | Not Available | Negative | 2822794 - 2823255 | 17188.8 |
| general secretion pathway protein l | SAMEA3752620_02676 | Not Available | Negative | 2823252 - 2824415 | 44456.1 |
| general secretion pathway protein k | SAMEA3752620_02677 | Not Available | Negative | 2824430 - 2825413 | 37520.5 |
| general secretion pathway protein j | SAMEA3752620_02678 | Not Available | Negative | 2825406 - 2825993 | 22255.5 |
| general secretion pathway protein i | SAMEA3752620_02679 | Not Available | Negative | 2825986 - 2826363 | 14004.4 |
| general secretion pathway protein h | SAMEA3752620_02680 | Not Available | Negative | 2826360 - 2826869 | 18565.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





