Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein slyx | SAMEA3752620_02661 | Not Available | Negative | 2810470 - 2810688 | 8214.8 |
| fkbp-type peptidyl-prolyl isomerase | SAMEA3752620_02662 | Not Available | Positive | 2810909 - 2811721 | 28913.4 |
| putative dna-binding transcriptional regulator | SAMEA3752620_02663 | Not Available | Positive | 2811888 - 2812610 | 26822.1 |
| trna 2-thiouridine synthesizin protein d (sulfurtransferase) | SAMEA3752620_02664 | Not Available | Positive | 2812610 - 2812996 | 13671.1 |
| trna 2-thiouridine synthesizing protein c | SAMEA3752620_02665 | Not Available | Positive | 2812996 - 2813355 | 13073.8 |
| trna 2-thiouridine synthesizing protein b | SAMEA3752620_02666 | Not Available | Positive | 2813363 - 2813650 | 10678.9 |
| 30s ribosomal protein s12 | SAMEA3752620_02667 | Not Available | Positive | 2813776 - 2814150 | 13737.9 |
| 30s ribosomal protein s7 | SAMEA3752620_02668 | Not Available | Positive | 2814247 - 2814717 | 17605.4 |
| translation elongation factor g | SAMEA3752620_02669 | Not Available | Positive | 2814814 - 2816928 | 77643.8 |
| protein chain elongation factor ef-tu | SAMEA3752620_02670 | Not Available | Positive | 2816999 - 2818183 | 43286.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





