Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite transporter | SAMEA3752620_02641 | Not Available | Negative | 2790519 - 2791325 | 28565.2 |
| nitrite reductase (nad(p)h) small subunit | SAMEA3752620_02642 | Not Available | Negative | 2791451 - 2791777 | 12270.6 |
| nitrite reductase | SAMEA3752620_02643 | Not Available | Negative | 2791774 - 2794317 | 93142.6 |
| major facilitator superfamily protein | SAMEA3752620_02644 | Not Available | Negative | 2794579 - 2795760 | 43197.0 |
| peptidyl-prolyl cis-trans isomerase | SAMEA3752620_02645 | Not Available | Positive | 2796031 - 2796603 | 20432.5 |
| protein | SAMEA3752620_02646 | Not Available | Positive | 2796708 - 2796875 | 6668.12 |
| cell filamentation protein | SAMEA3752620_02647 | Not Available | Positive | 2796865 - 2797467 | 22988.4 |
| para-aminobenzoate synthase glutamine amidotransferase component i | SAMEA3752620_02648 | Not Available | Positive | 2797499 - 2798062 | 20787.1 |
| bifunctional n-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein | SAMEA3752620_02649 | Not Available | Positive | 2798148 - 2799368 | 43849.6 |
| inner membrane protein | SAMEA3752620_02650 | Not Available | Negative | 2799435 - 2801525 | 79479.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





