Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid transporter | SAMEA3752620_02631 | Not Available | Positive | 2781191 - 2782096 | 33514.4 |
| prd domain protein,/aha_3910 family | SAMEA3752620_02632 | Not Available | Positive | 2782113 - 2782475 | 13529.6 |
| alanine racemase like protein | SAMEA3752620_02633 | Not Available | Positive | 2782559 - 2783722 | 42307.7 |
| metalloenzyme superfamily protein | SAMEA3752620_02634 | Not Available | Positive | 2783722 - 2784948 | 44700.4 |
| phosphotriesterase-like protein | SAMEA3752620_02635 | Not Available | Positive | 2784945 - 2785823 | 32891.4 |
| protein | SAMEA3752620_02636 | Not Available | Positive | 2785834 - 2786187 | 12479.5 |
| inner membrane protein | SAMEA3752620_02637 | Not Available | Positive | 2786199 - 2787503 | 46507.3 |
| putative dna-binding protein | SAMEA3752620_02638 | Not Available | Positive | 2787515 - 2788600 | 38630.9 |
| secreted peptide | SAMEA3752620_02639 | Not Available | Negative | 2788708 - 2788875 | 5819.16 |
| siroheme synthase | SAMEA3752620_02640 | Not Available | Negative | 2789127 - 2790500 | 49980.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





