Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | SAMEA3752620_00015 | Not Available | Negative | 13956 - 15578 | 60143.7 |
| rna polymerase sigma factor rpoe | SAMEA3752620_00016 | Not Available | Positive | 15986 - 16561 | 21697.0 |
| sigma-e factor negative regulator | SAMEA3752620_00017 | Not Available | Positive | 16594 - 17244 | 24336.8 |
| sigma-e factor regulatory protein | SAMEA3752620_00018 | Not Available | Positive | 17244 - 18200 | 35751.8 |
| sigma-e factor regulatory protein | SAMEA3752620_00019 | Not Available | Positive | 18197 - 18676 | 16597.3 |
| gtp-binding protein lepa | SAMEA3752620_00020 | Not Available | Positive | 18874 - 20673 | 66574.1 |
| signal peptidase i | SAMEA3752620_00021 | Not Available | Positive | 20689 - 21663 | 35948.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 22594 - 22708 | Not Available |
| gtp-binding protein era | SAMEA3752620_00023 | Not Available | Positive | 22612 - 23517 | 33798.1 |
| dna repair protein | SAMEA3752620_00024 | Not Available | Positive | 23529 - 24257 | 27364.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





