Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA3752620_02601 | Not Available | Negative | 2748678 - 2749571 | 33924.0 |
| dna-binding transcriptional regulator | SAMEA3752620_02602 | Not Available | Negative | 2749774 - 2750010 | 8660.66 |
| ferrous iron transport protein b | SAMEA3752620_02603 | Not Available | Negative | 2750010 - 2752331 | 84462.7 |
| ferrous iron transport protein a | SAMEA3752620_02604 | Not Available | Negative | 2752348 - 2752575 | 8371.31 |
| putative transcription accessory protein | SAMEA3752620_02605 | Not Available | Negative | 2753013 - 2755334 | 85103.6 |
| transcription elongation factor greb | SAMEA3752620_02606 | Not Available | Negative | 2755431 - 2755907 | 18546.1 |
| transcriptional regulatory protein ompr | SAMEA3752620_02607 | Not Available | Positive | 2756135 - 2756854 | 27355.3 |
| osmolarity sensor protein envz | SAMEA3752620_02608 | Not Available | Positive | 2756851 - 2758203 | 50335.1 |
| hth-type transcriptional regulator yiag | SAMEA3752620_02609 | Not Available | Negative | 2758235 - 2758531 | 11118.4 |
| toxin rele | SAMEA3752620_02610 | Not Available | Negative | 2758590 - 2758907 | 12267.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





