Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein rtcb | SAMEA3752620_02591 | Not Available | Positive | 2734507 - 2735733 | 45184.3 |
| rna 3'-terminal-phosphate cyclase | SAMEA3752620_02592 | Not Available | Positive | 2735737 - 2736753 | 35940.5 |
| regulatory protein | SAMEA3752620_02593 | Not Available | Negative | 2736796 - 2739501 | 103085.0 |
| maltodextrin phosphorylase | SAMEA3752620_02594 | Not Available | Positive | 2740124 - 2742517 | 90512.3 |
| 4-alpha-glucanotransferase | SAMEA3752620_02595 | Not Available | Positive | 2742527 - 2744611 | 78521.6 |
| gluconate transporter, high-affinity gnt i system | SAMEA3752620_02596 | Not Available | Negative | 2744656 - 2745972 | 45969.6 |
| putative thioredoxin-like protein | SAMEA3752620_02597 | Not Available | Negative | 2746333 - 2746908 | 20998.9 |
| gluconate periplasmic binding protein | SAMEA3752620_02598 | Not Available | Negative | 2746967 - 2747650 | 25753.8 |
| carboxylesterase (biotin synthesis protein bioh) | SAMEA3752620_02599 | Not Available | Positive | 2747688 - 2748458 | 28619.8 |
| uncharacterised protein | SAMEA3752620_02600 | Not Available | Negative | 2748562 - 2748660 | 3787.74 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





