Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan-branching protein | SAMEA3752620_02571 | Not Available | Positive | 2709729 - 2711915 | 84359.5 |
| glycogen debranching protein | SAMEA3752620_02572 | Not Available | Positive | 2711912 - 2713885 | 73608.6 |
| glucose-1-phosphate adenylyltransferase | SAMEA3752620_02573 | Not Available | Positive | 2713903 - 2715198 | 48700.4 |
| glycogen synthase | SAMEA3752620_02574 | Not Available | Positive | 2715198 - 2716631 | 52825.4 |
| glycogen phosphorylase | SAMEA3752620_02575 | Not Available | Positive | 2716650 - 2719097 | 93206.7 |
| major fimbrial subunit | SAMEA3752620_02576 | Not Available | Positive | 2719589 - 2720293 | 24182.9 |
| fimbrial chaperone protein | SAMEA3752620_02577 | Not Available | Positive | 2720394 - 2721146 | 28204.4 |
| outer membrane usher protein | SAMEA3752620_02578 | Not Available | Positive | 2721183 - 2723777 | 95726.9 |
| putative minor fimbrial subunit aufd | SAMEA3752620_02579 | Not Available | Positive | 2723777 - 2724340 | 19987.4 |
| putative minor fimbrial subunit precursor | SAMEA3752620_02580 | Not Available | Positive | 2724291 - 2724863 | 20498.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





