Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, duf2756 family | SAMEA3752620_02560 | Not Available | Negative | 2699240 - 2699680 | 16624.9 |
| gamma-glutamyltranspeptidase | SAMEA3752620_02561 | Not Available | Positive | 2699800 - 2701545 | 61965.7 |
| putative acetyltransferase | SAMEA3752620_02562 | Not Available | Negative | 2701605 - 2702093 | 18738.4 |
| putative oxidoreductase | SAMEA3752620_02564 | Not Available | Positive | 2702427 - 2703464 | 38784.1 |
| pirin-related protein | SAMEA3752620_02565 | Not Available | Positive | 2703587 - 2704282 | 26306.9 |
| gluconate utilization system gnt-i transcriptional repressor | SAMEA3752620_02566 | Not Available | Positive | 2704506 - 2705501 | 36424.3 |
| gluconate kinase | SAMEA3752620_02567 | Not Available | Positive | 2705640 - 2706167 | 19433.3 |
| low-affinity gluconate transporter | SAMEA3752620_02568 | Not Available | Positive | 2706171 - 2707511 | 46403.9 |
| ditp- and xtp- hydrolase | SAMEA3752620_02569 | Not Available | Negative | 2707568 - 2708161 | 21491.9 |
| aspartate-semialdehyde dehydrogenase | SAMEA3752620_02570 | Not Available | Positive | 2708353 - 2709456 | 40020.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





