Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter permease | SAMEA3752620_02550 | Not Available | Positive | 2690572 - 2691849 | 46314.3 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein | SAMEA3752620_02551 | Not Available | Positive | 2691846 - 2692613 | 28428.7 |
| leucine/isoleucine/valine transporter atp-binding subunit | SAMEA3752620_02552 | Not Available | Positive | 2692615 - 2693328 | 26297.9 |
| antitoxin of p1 addiction system | SAMEA3752620_02553 | Not Available | Positive | 2693416 - 2693637 | 8103.69 |
| toxin of p1 addiction system | SAMEA3752620_02554 | Not Available | Positive | 2693634 - 2694011 | 13965.1 |
| glycerol-3-phosphate abc transporter, substrate-binding protein | SAMEA3752620_02555 | Not Available | Positive | 2694220 - 2695536 | 48451.2 |
| glycerol-3-phosphate abc transporter permease | SAMEA3752620_02556 | Not Available | Positive | 2695712 - 2696599 | 33265.6 |
| sn-glycerol-3-phosphate abc transporter, permease protein | SAMEA3752620_02557 | Not Available | Positive | 2696596 - 2697441 | 31473.6 |
| sn-glycerol-3-phosphate abc transporter, atp-binding protein | SAMEA3752620_02558 | Not Available | Positive | 2697443 - 2698513 | 39571.5 |
| glycerophosphoryl diester phosphodiesterase | SAMEA3752620_02559 | Not Available | Positive | 2698510 - 2699253 | 27363.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





