Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3752620_02540 | Not Available | Negative | 2680800 - 2681069 | 10280.4 |
| 16s rrna m(2)g966-methyltransferase | SAMEA3752620_02541 | Not Available | Negative | 2681059 - 2681655 | 21678.8 |
| cell division protein ftsy | SAMEA3752620_02542 | Not Available | Positive | 2681805 - 2683301 | 54623.3 |
| cell division atp-binding membraine protein ftse | SAMEA3752620_02543 | Not Available | Positive | 2683304 - 2683972 | 24440.8 |
| cell division protein ftsx | SAMEA3752620_02544 | Not Available | Positive | 2683965 - 2685023 | 38545.9 |
| component of rna polymerase | SAMEA3752620_02545 | Not Available | Positive | 2685268 - 2686122 | 32470.6 |
| leu/ile/val-binding protein precursor | SAMEA3752620_02546 | Not Available | Positive | 2686394 - 2687497 | 39078.5 |
| putative acetyltransferase | SAMEA3752620_02547 | Not Available | Negative | 2687685 - 2688068 | 14492.3 |
| leucine-specific transport system | SAMEA3752620_02548 | Not Available | Positive | 2688492 - 2689601 | 39392.0 |
| high-affinity branched-chain amino acid abc transporter permease | SAMEA3752620_02549 | Not Available | Positive | 2689649 - 2690575 | 33014.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





