Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, substrate-binding protein | SAMEA3752620_02530 | Not Available | Negative | 2670639 - 2672213 | 58731.3 |
| 4'-phosphopantetheinyl transferase | SAMEA3752620_02531 | Not Available | Negative | 2672324 - 2672911 | 21724.8 |
| inner membrane protein | SAMEA3752620_02532 | Not Available | Negative | 2672966 - 2674015 | 38538.8 |
| major facilitator superfamily protein | SAMEA3752620_02533 | Not Available | Positive | 2674114 - 2675364 | 43430.1 |
| periplasmic protein dcrb | SAMEA3752620_02534 | Not Available | Negative | 2675368 - 2675925 | 19787.7 |
| inner membrane protein | SAMEA3752620_02535 | Not Available | Negative | 2675998 - 2676663 | 25285.3 |
| sulfurtransferase (trna 2-thiouridine synthesizin protein a) | SAMEA3752620_02536 | Not Available | Positive | 2676885 - 2677130 | 9167.15 |
| zinc/cadmium/mercury/lead-transporting atpase | SAMEA3752620_02537 | Not Available | Negative | 2677399 - 2679597 | 76831.3 |
| inner membrane protein | SAMEA3752620_02538 | Not Available | Negative | 2679671 - 2680297 | 23791.9 |
| putative receptor | SAMEA3752620_02539 | Not Available | Positive | 2680438 - 2680797 | 13543.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





