Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative periplasmic acid stress chaperone | SAMEA3752620_02490 | Not Available | Positive | 2629612 - 2629944 | 11858.3 |
| acid-resistance protein | SAMEA3752620_02491 | Not Available | Positive | 2630048 - 2630386 | 12523.1 |
| magnesium transporter atpase | SAMEA3752620_02492 | Not Available | Positive | 2630522 - 2631097 | 20582.5 |
| hemin importer atp-binding subunit | SAMEA3752620_02493 | Not Available | Negative | 2631149 - 2631919 | 28897.0 |
| putative iron compound abc transporter permease | SAMEA3752620_02494 | Not Available | Negative | 2631916 - 2632872 | 34014.1 |
| shuy-like protein | SAMEA3752620_02495 | Not Available | Negative | 2632957 - 2633580 | 21824.1 |
| shux-like protein | SAMEA3752620_02496 | Not Available | Negative | 2633580 - 2634074 | 18275.8 |
| putative oxygen independent coproporphyrinogen iii oxidase | SAMEA3752620_02497 | Not Available | Negative | 2634087 - 2635346 | 46621.8 |
| periplasmic binding protein | SAMEA3752620_02498 | Not Available | Negative | 2635444 - 2636358 | 32778.9 |
| hemin tonb-dependent receptor | SAMEA3752620_02499 | Not Available | Positive | 2637042 - 2639024 | 72475.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





