Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transport protein | SAMEA3752620_02469 | Not Available | Positive | 2602921 - 2604207 | 45439.2 |
| putative protease | SAMEA3752620_02470 | Not Available | Positive | 2604428 - 2605924 | 55544.5 |
| ketodeoxygluconokinase | SAMEA3752620_02471 | Not Available | Negative | 2606020 - 2606949 | 33995.2 |
| diguanylate phosphodiesterase | SAMEA3752620_02472 | Not Available | Positive | 2607181 - 2607948 | 29588.9 |
| putative outer membrane assembly protein | SAMEA3752620_02473 | Not Available | Positive | 2608018 - 2610078 | 74492.8 |
| major facilitator superfamily protein | SAMEA3752620_02474 | Not Available | Negative | 2610260 - 2611582 | 47226.9 |
| pp_02351 | SAMEA3752620_02475 | Not Available | Negative | 2611975 - 2612988 | Not Available |
| lysr family transcriptional regulator | SAMEA3752620_02476 | Not Available | Negative | 2613037 - 2613936 | 33341.6 |
| transcriptional regulator | SAMEA3752620_02477 | Not Available | Positive | 2614456 - 2615091 | 23836.2 |
| cytoplasmic trehalase | SAMEA3752620_02478 | Not Available | Negative | 2615110 - 2616759 | 63700.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





