Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein yhjt | SAMEA3752620_02459 | Not Available | Negative | 2588157 - 2588348 | 7364.39 |
| cellulose biosynthesis protease | SAMEA3752620_02460 | Not Available | Negative | 2588345 - 2589904 | 58822.8 |
| protein of uncharacterised function (duf2629) | SAMEA3752620_02461 | Not Available | Positive | 2590189 - 2590377 | 7060.37 |
| cell division protein | SAMEA3752620_02462 | Not Available | Positive | 2590389 - 2591141 | 27877.4 |
| cellulose synthase catalytic subunit | SAMEA3752620_02463 | Not Available | Positive | 2591138 - 2593750 | 99585.0 |
| cellulose synthase regulator protein | SAMEA3752620_02464 | Not Available | Positive | 2593791 - 2594528 | 26488.9 |
| cellulose synthase regulator protein | SAMEA3752620_02465 | Not Available | Positive | 2594559 - 2596100 | 57097.7 |
| endo-1,4-d-glucanase | SAMEA3752620_02466 | Not Available | Positive | 2596107 - 2597213 | 41727.4 |
| cellulose synthase subunit bcsc | SAMEA3752620_02467 | Not Available | Positive | 2597195 - 2600668 | 127792.0 |
| putative diguanylate cyclase | SAMEA3752620_02468 | Not Available | Positive | 2600789 - 2602738 | 72954.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





