Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transporter permease dppb | SAMEA3752620_02445 | Not Available | Positive | 2579135 - 2580154 | 37481.4 |
| dipeptide abc transporter permease | SAMEA3752620_02446 | Not Available | Positive | 2580164 - 2581066 | 32310.5 |
| dipeptide abc transporter atp-binding protein | SAMEA3752620_02447 | Not Available | Positive | 2581077 - 2582060 | 35846.5 |
| dipeptide transporter atp-binding subunit | SAMEA3752620_02448 | Not Available | Positive | 2582057 - 2583061 | 37520.6 |
| transport protein yhjv | SAMEA3752620_02449 | Not Available | Negative | 2583091 - 2584362 | 47307.4 |
| toxic polypeptide, small | SAMEA3752620_02451 | Not Available | Positive | 2584838 - 2584945 | 3864.89 |
| toxic polypeptide, small | SAMEA3752620_02453 | Not Available | Positive | 2585321 - 2585428 | 3882.93 |
| toxic polypeptide, small | SAMEA3752620_02455 | Not Available | Positive | 2585804 - 2585911 | 3882.93 |
| toxic polypeptide, small | SAMEA3752620_02457 | Not Available | Positive | 2586287 - 2586394 | 3882.93 |
| cellulose biosynthesis endoglucanase | SAMEA3752620_02458 | Not Available | Negative | 2586481 - 2588160 | 62069.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





