Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine endoprotease | SAMEA3752620_02403 | Not Available | Positive | 2532989 - 2534356 | 47222.0 |
| protease | SAMEA3752620_02404 | Not Available | Positive | 2534446 - 2535513 | 37656.6 |
| malate dehydrogenase | SAMEA3752620_02405 | Not Available | Negative | 2535576 - 2536514 | 32339.2 |
| arginine repressor | SAMEA3752620_02406 | Not Available | Positive | 2536949 - 2537419 | 16995.5 |
| protein ycfr | SAMEA3752620_02407 | Not Available | Positive | 2537785 - 2538048 | 9196.89 |
| barnase inhibitor | SAMEA3752620_02408 | Not Available | Negative | 2538103 - 2538375 | 10796.7 |
| p-hydroxybenzoic acid efflux pump subunit b | SAMEA3752620_02409 | Not Available | Negative | 2538467 - 2540434 | 73614.9 |
| p-hydroxybenzoic acid efflux pump subunit a | SAMEA3752620_02410 | Not Available | Negative | 2540440 - 2541372 | 34774.6 |
| protein aaex | SAMEA3752620_02411 | Not Available | Negative | 2541380 - 2541583 | 7847.01 |
| lysr family transcriptional regulator | SAMEA3752620_02412 | Not Available | Positive | 2541766 - 2542695 | 34518.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





