Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMEA3752620_02382 | Not Available | Negative | 2508352 - 2509080 | 27289.0 |
| isoprenoid biosynthesis protein with amidotransferase-like domain | SAMEA3752620_02383 | Not Available | Negative | 2509077 - 2509730 | 22982.9 |
| aerobic respiration control protein (bifunctional two-component sensor kinase/response regulator) | SAMEA3752620_02385 | Not Available | Negative | 2509960 - 2512296 | 87988.0 |
| putative radical sam protein | SAMEA3752620_02386 | Not Available | Negative | 2512392 - 2513321 | 34609.6 |
| glutamate synthase subunit alpha | SAMEA3752620_02387 | Not Available | Positive | 2513903 - 2518456 | 166749.0 |
| glutamate synthase (nadph) small subunit | SAMEA3752620_02388 | Not Available | Positive | 2518469 - 2519887 | 51973.2 |
| protein | SAMEA3752620_02389 | Not Available | Positive | 2520071 - 2521198 | 43574.2 |
| beta-galactosidase | SAMEA3752620_02390 | Not Available | Negative | 2521258 - 2521722 | 16974.6 |
| putative transcriptional regulator | SAMEA3752620_02391 | Not Available | Negative | 2521719 - 2522594 | 29591.5 |
| n-acetylmannosamine-6-phosphate 2-epimerase | SAMEA3752620_02392 | Not Available | Negative | 2522591 - 2523280 | 24075.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





