Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar fermentation stimulation protein b | SAMEA3752620_02362 | Not Available | Positive | 2494181 - 2494459 | 10509.6 |
| udp-n-acetylglucosamine l-carboxyvinyltransferase | SAMEA3752620_02363 | Not Available | Negative | 2494507 - 2495766 | 44820.4 |
| bola family transcriptional regulator | SAMEA3752620_02364 | Not Available | Negative | 2495821 - 2496090 | 10038.0 |
| putative anti-sigma factor antagonist | SAMEA3752620_02365 | Not Available | Negative | 2496235 - 2496528 | 10681.0 |
| putative organic solvent tolerance protein | SAMEA3752620_02366 | Not Available | Negative | 2496528 - 2497163 | 23949.9 |
| phospholipid abc transporter substrate-binding protein | SAMEA3752620_02367 | Not Available | Negative | 2497182 - 2497733 | 19577.3 |
| putative organic solvent tolerance protein | SAMEA3752620_02368 | Not Available | Negative | 2497738 - 2498520 | 27865.0 |
| abc transporter atp-binding protein | SAMEA3752620_02369 | Not Available | Negative | 2498528 - 2499337 | 29072.6 |
| calcium/sodium:proton antiporter | SAMEA3752620_02370 | Not Available | Positive | 2499547 - 2500524 | 34756.9 |
| d-arabinose 5-phosphate isomerase | SAMEA3752620_02371 | Not Available | Positive | 2500538 - 2501524 | 35197.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





