Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if2-alpha | SAMEA3752620_02340 | Not Available | Negative | 2472762 - 2475434 | 97355.5 |
| transcription termination/antitermination factor nusa | SAMEA3752620_02341 | Not Available | Negative | 2475459 - 2476946 | 54874.0 |
| ribosome maturation protein rimp | SAMEA3752620_02342 | Not Available | Negative | 2476974 - 2477426 | 16651.9 |
| Trna-met | Not Available | Not Available | Positive | 2477633 - 2477709 | Not Available |
| argininosuccinate synthetase | SAMEA3752620_02345 | Not Available | Positive | 2478057 - 2479400 | 49901.3 |
| outer-membrane protein yhbx | SAMEA3752620_02346 | Not Available | Negative | 2479408 - 2480925 | 56763.1 |
| Trna-leu | Not Available | Not Available | Positive | 2481490 - 2481576 | Not Available |
| preprotein translocase subunit secg | SAMEA3752620_02348 | Not Available | Negative | 2481591 - 2481923 | 11365.8 |
| phosphoglucosamine mutase | SAMEA3752620_02349 | Not Available | Negative | 2482151 - 2483488 | 47519.4 |
| dihydropteroate synthase | SAMEA3752620_02350 | Not Available | Negative | 2483481 - 2484329 | 30616.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





